5TJI

Ca2+ bound aplysia Slo1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.8 of the entry. See complete history


Literature

Structural basis for gating the high-conductance Ca(2+)-activated K(+) channel.

Hite, R.K.Tao, X.MacKinnon, R.

(2017) Nature 541: 52-57

  • DOI: https://doi.org/10.1038/nature20775
  • Primary Citation of Related Structures:  
    5TJI

  • PubMed Abstract: 

    The precise control of an ion channel gate by environmental stimuli is crucial for the fulfilment of its biological role. The gate in Slo1 K + channels is regulated by two separate stimuli, intracellular Ca 2+ concentration and membrane voltage. Slo1 is thus central to understanding the relationship between intracellular Ca 2+ and membrane excitability. Here we present the Slo1 structure from Aplysia californica in the absence of Ca 2+ and compare it with the Ca 2+ -bound channel. We show that Ca 2+ binding at two unique binding sites per subunit stabilizes an expanded conformation of the Ca 2+ sensor gating ring. These conformational changes are propagated from the gating ring to the pore through covalent linkers and through protein interfaces formed between the gating ring and the voltage sensors. The gating ring and the voltage sensors are directly connected through these interfaces, which allow membrane voltage to regulate gating of the pore by influencing the Ca 2+ sensors.


  • Organizational Affiliation

    Rockefeller University and Howard Hughes Medical Institute, 1230 York Avenue, New York, New York 10065, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
High conductance calcium-activated potassium channel1,070Aplysia californicaMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q5QJC5 (Aplysia californica)
Explore Q5QJC5 
Go to UniProtKB:  Q5QJC5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5QJC5
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PGW
Query on PGW

Download Ideal Coordinates CCD File 
B [auth A](1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
C40 H77 O10 P
PAZGBAOHGQRCBP-HGWHEPCSSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONFREALIGN
MODEL REFINEMENTREFMAC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM43949
Howard Hughes Medical Institute (HHMI)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2016-12-28
    Type: Initial release
  • Version 1.1: 2017-01-11
    Changes: Database references
  • Version 1.2: 2017-01-18
    Changes: Database references
  • Version 1.3: 2017-09-27
    Changes: Author supporting evidence, Data collection
  • Version 1.4: 2018-07-18
    Changes: Data collection
  • Version 1.5: 2018-10-03
    Changes: Data collection, Refinement description
  • Version 1.6: 2019-11-20
    Changes: Author supporting evidence
  • Version 1.7: 2019-12-18
    Changes: Other
  • Version 1.8: 2024-03-13
    Changes: Data collection, Database references, Derived calculations