6NX4

Structure of the C-terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase (eEF-2K)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY200 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE 900
24D HC-HSQC-NOESY-HN-HSQC360 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE 900
33D 3D NNH (15N-HSQC-NOESY-15N-HSQC400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 800
43D 1H-13C NOESY aliphatic360 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE 800
53D H-13C NOESY aromatic360 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE 800
63D HNCO400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
73D HNCA400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
83D HN(CO)CA400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 600
93D HNCACB400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
103D CBCA(CO)NH400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
113D HN(CA)CO400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
123D Hcc(co)NH400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 600
133D hCc(co)NH400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 600
143D HCCH-TOCSY400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 600
153D HCCH-TOCSY400 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 20 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 600
162D 15N HSQC-IPAP340 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 14 mg/mL Pf1 phage, 14 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
173D IPAP-J-HNCO340 uM [U-99% 13C; U-99% 15N] eEF2K (562-725), 14 mg/mL Pf1 phage, 14 mM sodium phosphate, 100 mM sodium chloride, 4 mM DTT, 0.2 mM EDTA, 2 mM AEBSF protease inhibitor95% H2O/5% D2O20 mM Phosphate 100 mM NaCl6.51 atm298.15Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE800
3BrukerAVANCE III800
4BrukerAVANCE III700
5BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsexplicit waterARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number20
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6processingSMILEYing, J., Delaglio, F., Torchia, D. A. & Bax, A.
5data analysisNMRViewJohnson, One Moon Scientific
2data analysisTALOSNShen, Y. & Bax, A.
3data analysisPALESZweckstetter, M
4peak pickingNMRViewJohnson, One Moon Scientific
7structure calculationARIALinge, O'Donoghue and Nilges