2OYA
Crystal structure analysis of the dimeric form of the SRCR domain of mouse MARCO
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2oyaa1 | Alpha and beta proteins (a+b) | SRCR-like | SRCR-like | automated matches | automated matches | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d2oyaa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2oyab1 | Alpha and beta proteins (a+b) | SRCR-like | SRCR-like | automated matches | automated matches | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2oyab2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00530 | e2oyaA1 | A: a+b complex topology | X: SRCR-like | H: SRCR-like (From Topology) | T: SRCR-like | F: PF00530 | ECOD (1.6) |
B | PF00530 | e2oyaB1 | A: a+b complex topology | X: SRCR-like | H: SRCR-like (From Topology) | T: SRCR-like | F: PF00530 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.250.10 | Alpha Beta | Roll | Mac-2 Binding Protein | SRCR-like domain | CATH (4.3.0) |
B | 3.10.250.10 | Alpha Beta | Roll | Mac-2 Binding Protein | SRCR-like domain | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
SRCR Marco domain 1 | 1S | Mus musculus (house mouse) | Marco | S-LIKE-DOMAIN SRCR1 | RPI | 1S_1S | IMGT (202416-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01391 | Collagen triple helix repeat (20 copies) (Collagen) | Collagen triple helix repeat (20 copies) | - | Repeat | |
PF00530 | Scavenger receptor cysteine-rich domain (SRCR) | Scavenger receptor cysteine-rich domain | These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR017448 | SRCR-like domain | Domain | |
IPR001190 | SRCR domain | Domain | |
IPR036772 | SRCR-like domain superfamily | Homologous Superfamily |