Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1sfca_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptobrevin Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Ed1sfce_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptobrevin Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Id1sfci_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptobrevin Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd1sfcb_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Syntaxin 1A Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Fd1sfcf_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Syntaxin 1A Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Jd1sfcj_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Syntaxin 1A Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd1sfcc_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Gd1sfcg_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Kd1sfck_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd1sfcd_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Hd1sfch_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Ld1sfcl_ Coiled coil proteins Parallel coiled-coil SNARE fusion complex SNARE fusion complex Synaptosomal-associated protein SNAP-25 Norway rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySNARE fusion complex8043664 3001549 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySNARE fusion complex8043664 3001549 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySNARE fusion complex8043664 3001549 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySNARE fusion complex8043667 3001549 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySNARE fusion complex8043667 3001549 SCOP2B (2022-06-29)
KSCOP2B SuperfamilySNARE fusion complex8043667 3001549 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
E1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
I1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
J1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
C1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
G1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
K1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
H1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
L1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, E, I
PF00957Synaptobrevin (Synaptobrevin)Synaptobrevin- Family
B, F, J
PF05739SNARE domain (SNARE)SNARE domain- Family
B, F, J
PF00804Syntaxin (Syntaxin)SyntaxinSyntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal d ...Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms; in syntaxin 1A (Swiss:O35526) it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis, ER-Golgi transport and Golgi-endosome transport, for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins, Rab GTPases, and tethering factors [6].
Domain
D, H, L
PF00835SNAP-25 family (SNAP-25)SNAP-25 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E, I
PROTEIN (SYNAPTOBREVIN 2)
B, F, J
PROTEIN (SYNTAXIN 1A)
C, G, K
PROTEIN (SNAP-25B)
D, H, L
PROTEIN (SNAP-25B)